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Articles

History of Genetics

Daniel J. Fairbanks and Scott Abbott. 2016. Darwin’s influence on Mendel: evidence from a new translation of Mendel’s paper. Genetics 204: 401–405. http://www.ncbi.nlm.nih.gov/pubmed/27729491 http://www.genetics.org/content/204/2/401

Scott Abbott and Daniel J. Fairbanks. 2016. Experiments on Plant Hybrids by Gregor Mendel. Genetics 204: 407–422. http://www.ncbi.nlm.nih.gov/pubmed/27729492 http://www.genetics.org/content/204/2/407

Daniel J. Fairbanks 2015. The conclusion of the Mendel-Fisher controversy. Folia Mendeliana 51(2):11–20.

Daniel L. Hartl and Daniel J. Fairbanks. 2007. Mud sticks: on the alleged falsification of Mendel’s data. Genetics 175: 975–979. http://www.ncbi.nlm.nih.gov/pubmed/17384156

Daniel J. Fairbanks and Bryce Rytting. 2001. Mendelian controversies: a botanical and historical review. American Journal of Botany 88: 737–752. http://www.ncbi.nlm.nih.gov/pubmed/11353700

Daniel J. Fairbanks and G. Bruce Schaalje. 2007. The tetrad pollen model fails to explain the bias in Mendel’s pea (Pisum sativum) experiments. Genetics 177: 2531–2534. http://www.ncbi.nlm.nih.gov/pubmed/18073445

Julie F. Westerlund and Daniel J. Fairbanks. 2010. Gregor Mendel’s classic paper and the nature of science in genetics courses. Hereditas 147: 293–303. http://www.ncbi.nlm.nih.gov/pubmed/21166799

Julie F. Westerlund and Daniel J. Fairbanks. 2004. Gregor Mendel and “myth conceptions.” Science Education 88: 754–758. http://onlinelibrary.wiley.com/doi/10.1002/sce.20007/abstract

 

Human Genetics and Evolution

G. J. Parker, T. Leppert, D.S. Anex, J.K. Hilmer N. Matsunami,. L. Baird, J. Stevens. K. Parsawar, B.P. Durbin-Johnson, D.M. Rocke. C. Nelson, D.J. Fairbanks, A.S. Wilson, R.H.Rice, S.R. Woodward, B. Bothner, B. Hart, and M. Leppert. 2016. Demonstration of protein-based human identification using the hair-shaft proteome. PLOS-One DOI:10.1371/journal.pone.0160653 https://www.ncbi.nlm.nih.gov/pubmed/27603779

Daniel J. Fairbanks, Aaron D. Fairbanks, T. Heath Ogden, Glendon Parker, and Peter J. Maughan. 2012. NANOGP8: evolution of a human-specific retro-oncogene. G3: Genes, Genomes, Genetics 2: 1447–1457 http://www.g3journal.org/content/2/11/1447.full

Daniel J. Fairbanks and Peter J. Maughan. 2006. Evolution of the NANOG pseudogene family in the human and chimpanzee genomes. BMC Evolutionary Biology 6: 12. http://www.ncbi.nlm.nih.gov/pubmed/16469101

Jerald B. Johnson, Marta Adair, Byron J. Adams, Daniel J. Fairbanks, Velma Itamura, Duane E. Jeffery, Duane Merrell, Scott M. Ritter, and Richard R. Tolman. 2009. Evolution Education in Utah: A State Office of EducationUniversity Partnership Focuses on Why Evolution Matters. Evolution: Education and Outreach 2:349358. http://link.springer.com/article/10.1007/s12052-009-0145-0

 

International Scientific Development—Quinoa and Amaranth

J.W. Clouse, D. Adhikary, J.T. Page, T. Ramaraj, M.K. Deyholos, J.A. Udall, D.J. Fairbanks, E.N. Jellen, and P.J. Maughan. 2016. The amaranth genome: genome, transcriptome, and physical map assembly. Plant Genome 9. doi:10.3835/plantgenome2015.07.0062 https://www.ncbi.nlm.nih.gov/pubmed/27898770

PJ Maughan, SM Smith, JA Rojas-Beltrán, D Elzinga, JA Raney, EN Jellen, A Bonifacio, JA Udall, DJ Fairbanks. 2012. Single nucleotide polymorphisms identification, characterization and linkage mapping in Chenopodium quinoa. The Plant Genome. 2012 Sep;5(3):1-7. https://www.crops.org/publications/tpg/articles/5/3/114 (featured on the cover of the November 2012 issue https://www.crops.org/publications/tpg/tocs/5/3)

PJ Maughan, TB Turner, CE Coleman, DB Elzinga, EN Jellen, JA Morales, JA Udall, DJ Fairbanks, and A Bonifacio. 2009. Characterization of salt overly sensitive 1 (SOS1) gene homeologs in quinoa (Chenopodium quinoa Willd.). Genome 52: 647–657. http://www.ncbi.nlm.nih.gov/pubmed/19767895

DE Jarvis, OR Kopp, EN Jellen, MA Mallory, J Pattee, A Bonifacio, CE Coleman, MR Stevens, DJ Fairbanks, and PJ Maughan. 2008. Simple sequence repeat marker development and genetic mapping in quinoa (Chenopodium quinoa Willd.). Journal of Genetics 87: 39–51. http://www.ncbi.nlm.nih.gov/pubmed/18560173

M.R.B. Balzotti, J.N. Thornton, P.J. Maughan, D.A. McClellan, M.R. Stevens, E.N. Jellen, D.J. Fairbanks, and C.E. Coleman. 2008. Expression and evolutionary relationships of the Chenopodium quinoa 11S seed storage protein gene. International Journal of Plant Sciences 169:281–291.

S.A. Christensen, D.B. Pratt, C. Pratt, P.T. Nelson, M.R. Stevens, E.N. Jellen, C.E. Coleman, D.J. Fairbanks, A. Bonifacio, and P. J. Maughan. 2007. Assessment of genetic diversity in the USDA and CIP-FAO international nursery collections of quinoa (Chenopodium quinoa Willd.) using microsatellite markers. Plant Genetic Resources 5:82–95.

PJ Maughan, BA Kolano, J Maluszynska, ND Coles, A Bonifacio, J Rojas, CE Coleman, MR Stevens, DJ Fairbanks, SE Parkinson, and EN Jellen. 2006. Molecular and cytological characterization of ribosomal RNA genes in Chenopodium quinoa and Chenopodium berlandieri. Genome 49: 825–839. http://www.ncbi.nlm.nih.gov/pubmed/16936791

MR Stevens, CE Coleman, SE Parkinson, PJ Maughan, HB Zhang, MR Balzotti, DL Kooyman, K Arumuganathan, A Bonifacio, DJ Fairbanks, EN Jellen, and JJ Stevens. 2006. Construction of a quinoa (Chenopodium quinoa Willd.) BAC library and its use in identifying genes encoding seed storage proteins. Theoretical and Applied Genetics 112: 1593–1600. http://www.ncbi.nlm.nih.gov/pubmed/16586115

S.L. Mason, M.R. Stevens, E.N. Jellen, A. Bonifacio, D.J. Fairbanks, C.E. Coleman, R.R. McCarty, A.G. Rasmussen, and P.J. Maughan. 2005. Development and use of microsatellite markers for germplasm characterization in quinoa (Chenopodium quinoa Willd.). Crop Science 45:1618–1630.

N.D. Coles, C.E. Coleman, S.A. Christensen, E.N. Jellen, M.R. Stevens, A. Bonifacio, J.A. Rojas-Beltran, D.J. Fairbanks, and P.J. Maughan. 2004. Development and use of an expressed sequenced tag library in quinoa (Chenopodium quinoa Willd.) for the discovery of single nucleotide polymorphisms. Plant Science  168:439–447.

P.J. Maughan, A. Bonifacio, E.N. Jellen, M.R. Stevens, C.E. Coleman, M. Ricks, S.L. Mason, D.E. Jarvis, B.W. Gardunia, and D.J. Fairbanks. 2004. A genetic linkage map of quinoa (Chenopodium quinoa) based on AFLP, RAPD, and SSR markers. Theoretical and Applied Genetics 109:1188–1195.

K.H. Wright, K.C. Huber, D.J. Fairbanks, and C.S. Huber. 2002. Isolation and characterization of Atriplex hortensis and sweet Chenopodium quinoa starches. Cereal Chemistry 79:715–719.

K.H. Wright, O.A. Pike, D.J. Fairbanks, and C.S. Huber. 2002. Composition of Atriplex hortensis, sweet and bitter Chenopodium quinoa seeds. Journal of Food Science 67:1383–1385.

P.M. Ruas, A. Bonifacio, C.F. Ruas, D.J. Fairbanks, and W.R. Andersen. 1999. Genetic relationships among 19 accessions of six species of Chenopodium L. by random amplified polymorphic DNA fragments (RAPD). Euphytica 105:25–32.

S.G. Wood, L.D. Lawson, D.J. Fairbanks, L.R. Robison, and W.R. Andersen. 1993. Seed lipid content and fatty acid composition of three quinoa cultivars. Journal of Food Composition and Analysis 6:41–44.

D.J. Fairbanks. 1990. Politics, science, and hunger: An interdisciplinary approach to honors education in agriculture. Journal of Natural Resources and Life Sciences Education 19:184–186.

D.J. Fairbanks, K.W. Burgener, L.R. Robison, W.R. Andersen, and E. Ballón. 1990. Electrophoretic characterization of quinoa seed proteins. Plant Breeding 104:190–195.

 

Plant and Animal Genetics

A.P. Ramakrishnan, S.E. Meyer, D.J. Fairbanks, and C.E. Coleman. 2006. Ecological significance of microsatellite variation in western North American populations of Bromus tectorum. Plant Species Biology 21:61–73.

S.E. Meyer, D.L. Nelson, S. Clement, J. Waters, M. Stevens, and D.J. Fairbanks. 2005. Genetic variation in Ustilago bullata: molecular genetic markers and virulence on Bromus tectorum host lines. International Journal of Plant Sciences 166:105–115.

AP Ramakrishnan, SE Meyer, J Waters, MR Stevens, CE Coleman, and DJ Fairbanks. 2004. Correlation between molecular markers and adaptively significant genetic variation in Bromus tectorum. American Journal of Botany 91: 797–803. http://www.ncbi.nlm.nih.gov/pubmed/21653434

A. P. Ramakrishnan, C.E. Coleman, S.E. Meyer, and D.J. Fairbanks. 2002. Microsatellite markers for Bromus tectorum (cheatgrass). Molecular Ecology Notes 2:22–23.

C.F. Ruas, P.M. Ruas, H.C. Stutz, and D.J. Fairbanks. 2001. Cytogenetic studies in the genus Atriplex (Chenopodiaceae). Caryologia 54:129–145.

D.J. Fairbanks. 2000. Development of genetic resistance to iron-deficiency chlorosis in soybean. Journal of Plant Nutrition 23:1903–1914.

C.F. Ruas, D.J. Fairbanks, W.R. Andersen, R.P. Evans, H.C. Stutz, and P.M. Ruas. 1998. Male-specific DNA in Atriplex garrettii. American Journal of Botany 85:162–167.

J. Mudge, W.R. Andersen, R.L. Keher, and D.J. Fairbanks. 1996. A RAPD genetic map in Saccharum officinarum. Crop Science 36:1362–1366.

K.A. Cook, V.D. Jolley, D.J. Fairbanks, and L.R. Robison. 1996. Identification of iron reductase isozymes in soybeans. Journal of Plant Nutrition 19:457–467.

P.M. Ruas, C.F. Ruas, D.J. Fairbanks, W.R. Andersen, and J.R.S. Cabral. 1995. Genetic relationships among four varieties of pineapple, Ananas comosus, relealed by random amplified polymorphic DNA (RAPD) analysis. Genetics and Molecular Biology 18:413–416.

C.R. Riede, D.J. Fairbanks, W.R. Andersen, R.L. Kehrer, and L.R. Robison. 1994. Enhancement of RAPD analysis by restriction endonuclease digestion of template DNA in wheat. Plant Breeding 113:254–257.

D.K. Transue, D.J. Fairbanks, L.R. Robison, W.R. Andersen, and J.E. Ballón. 1994. Species identification by RAPD analysis of grain amaranth genetic resources. Crop Science 34:1385–1389.

W.B. Stevens, V.D. Jolley, N.C. Hansen, and D.J. Fairbanks. 1993. Modified procedures for commercial adaptation of root iron reducing capacity as a screening technique. Journal of Plant Nutrition 16:2507–2519.

D.J. Fairbanks, A. Waldrigues, C.F. Ruas, P.M. Ruas, P.J. Maughan, L.R. Robison, W.R. Andersen, C.R. Riede, C.S. Pauley, L.G. Caetano, O.M.N. Arantes, M.H.P. Fungaro, M.C. Vidotto, and S.E. Jankevicius. 1993. Efficient caracterization of biological diversity using field DNA extraction and random amplified polymorphic DNA markers. Genetics and Molecular Biology 16:11–22.

V.D. Jolley, D.J. Fairbanks, W.B Stevens, R.E. Terry, and J.H. Orf. 1992. Root iron-reduction capacity for genotypic evaluation of iron efficiency in soybean. Journal of Plant Nutrition 15:1679–1690.

S. Xiong, R.L. Park, W.R. Andersen, R. P. Evans, and D.J. Fairbanks. 1992. Random amplified polymorphic DNA (RAPD) markers for paternity identification in multiple-sired mink litters. Norwegian Journal of Agricultural Sciences 9:201–205.

D.J. Fairbanks, K.W. Burgener, L.R. Robison, W.R. Andersen, and E. Ballón. 1990. Electrophoretic characterization of quinoa seed proteins. Plant Breeding 104:190–195.

S.E. Smith and D.J. Fairbanks. 1989. Effects of pollination method on strain cross yield in lucerne. Plant Breeding 102:79–82.

S.E. Smith and D.J. Fairbanks. 1989. Registration of AZ-88MS and AZ-88NDC nondormant male-sterile and male-fertile maintainer alfalfa germplasms. Crop Science 29:1095.

D.J. Fairbanks, S.E. Smith, and J.K. Brown. 1988. Inheritance of large mitochondrial RNAs in alfalfa. Theoretical and Applied Genetics 76:619–622.

D.J. Fairbanks, J.H. Orf, W.P. Inskeep, and P.R. Bloom. 1987. Evaluation of soybean genotypes for iron-deficiency chlorosis in potted calcareous soil. Crop Science 27:953–957.

D.J. Fairbanks. 1987. Book Review: Potatoes: programs and research for developing countries. D.H. Horton.  Annals of Regional Science 21 (3):182–184.

J.L. Farmer and D.J. Fairbanks. 1986. Interaction of the bw and w loci in Drosophila melanogaster.  Drosophila Information Service 63:50–51.

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